2016-04-22 Cartoon Steve Niederer

Publications

Masre, S.F., Rath, N., Olson, M.F. and Greenhalgh, D.A. (2017) ROCK2/rasHa cooperation induce malignant conversion via p53 loss, elevated NF-κβ and tenascin C-associated rigidity but p21 inhibits ROCK2/NF-κβ-mediated progression. Oncogene, 36, pp. 2529-2542. (doi:10.1038/onc.2016.402) (PMID:27991921)

Watt, J., Kennedy, S., Ahmed, N., Hayhurst, J., McClure, J. D., Berry, C. , Wadsworth, R. M. and Oldroyd, K. G. (2016) The relationship between oxidised LDL, endothelial progenitor cells and coronary endothelial function in patients with CHD. Open Heart, 3(1), e000342. (doi:10.1136/openhrt-2015-000342) (PMID:26848395) (PMCID:PMC4731840)

Wang, L., Roper, S. M. , Hill, N. A. and Luo, X. (2017) Propagation of dissection in a residually-stressed artery model. Biomechanics and Modeling in Mechanobiology, 16(1), pp. 139-149. (doi:10.1007/s10237-016-0806-1) (PMID:27395061)

Stewart, P. S. , Waters, S. L., El Sayed, T., Vella, D. and Goriely, A. (2016) Wrinkling, creasing, and folding in fiber-reinforced soft tissues. Extreme Mechanics Letters, 8, pp. 22-29. (doi:10.1016/j.eml.2015.10.005)

Lee, M. M.Y. et al. (2016) Non-invasive versus invasive management in patients with prior coronary artery bypass surgery with a non-ST segment elevation acute coronary syndrome: study design of the pilot randomised controlled trial and registry (CABG-ACS). Open Heart, 3(1), e000371. (doi:10.1136/openhrt-2015-000371) (PMID:27110377) (PMCID:PMC4838768)

Cachat, E., Liu, W., Martin, K. C., Yuan, X., Yin, H. , Hohenstein, P. and Davies, J. A. (2016) 2- and 3-dimensional synthetic large-scale de novo patterning by mammalian cells through phase separation. Scientific Reports, 6, 20664. (doi:10.1038/srep20664) (PMID:26857385) (PMCID:PMC4746622)

Berry, C. et al. (2016) Prognostic significance of anaemia in patients with heart failure with preserved and reduced ejection fraction: results from the MAGGIC individual patient data meta-analysis. QJM: An International Journal of Medicine, 109(6), pp. 377-382. (doi:10.1093/qjmed/hcv087) (PMID:25979270)

Li, W. and Luo, X. Y. (2016) An invariant-based damage model for human and animal skins. Annals of Biomedical Engineering, 44(10), pp. 3109-3122. (doi:10.1007/s10439-016-1603-9) (PMID:27066788) (PMCID:PMC5042997)

Carrick, D. et al. (2016) Prognostic significance of infarct core pathology revealed by quantitative non-contrast in comparison to contrast cardiac magnetic resonance imaging in reperfused ST-elevation myocardial infarction survivors. European Heart Journal, 37(13), pp. 1044-1059. (doi:10.1093/eurheartj/ehv372) (PMID:26261290) (PMCID:PMC4816961)

Ahmed, N. et al. (2016) Safety of guidewire-based measurement of fractional flow reserve and the index of microvascular resistance using intravenous adenosine in patients with acute or recent myocardial infarction. International Journal of Cardiology, 202, pp. 305-310. (doi:10.1016/j.ijcard.2015.09.014) (PMID:26418191) (PMCID:PMC4669307)

Tweedy, L., Susanto, O. and Insall, R. H. (2016) Self-generated chemotactic gradients—cells steering themselves. Current Opinion in Cell Biology, 42, pp. 46-51. (doi:10.1016/j.ceb.2016.04.003) (PMID:27105308)

Husmeier, D. , Ferguson, E., Matthiopoulos, J. and Insall, R. (2017) Statistical Inference of the Drivers of Collective Cell Movement. RSS 2017 Annual Conference, Glasgow, Scotland, 04-07 Sep 2017.

Paun, L., Haider, M., Hill, N. , Olufsen, M., Qureshi, M., Papamarkou, T. and Husmeier, D. (2017) Parameter Inference in the Pulmonary Blood Circulation. RSS 2017 Annual Conference, Glasgow, Scotland, 04-07 Sep 2017.

Song, Y., Yin, H. and Huang, W. E. (2016) Raman activated cell sorting. Current Opinion in Chemical Biology, 33, pp. 1-8. (doi:10.1016/j.cbpa.2016.04.002) (PMID:27100046)

Chen, W.W., Gao, H. , Luo, X.Y. and Hill, N.A. (2016) Study of cardiovascular function using a coupled left ventricle and systemic circulation model. Journal of Biomechanics, 49(12), pp. 2445-2454. (doi:10.1016/j.jbiomech.2016.03.009) (PMID:27040388) (PMCID:PMC5038162)

Carrick, D. et al. (2016) Myocardial hemorrhage after acute reperfused ST-segment-elevation myocardial infarction. Circulation: Cardiovascular Imaging, 9(1), e004148. (doi:10.1161/CIRCIMAGING.115.004148) (PMID:26763281) (PMCID:PMC4718183)

Gao, H. , Mangion, K., Carrick, D., Husmeier, D. , Luo, X. and Berry, C. (2017) Estimating prognosis in patients with acute myocardial infarction using personalized computational heart models. Scientific Reports, 7, 13527. (doi:10.1038/s41598-017-13635-2) (PMID:29051544) (PMCID:PMC5648923)

Greenwood, J. P. et al. (2016) Effect of care guided by cardiovascular magnetic resonance, myocardial perfusion scintigraphy, or NICE guidelines on subsequent unnecessary angiography rates: the CE-MARC 2 randomized clinical trial. JAMA: Journal of the American Medical Association, 316(10), pp. 1051-1060. (doi:10.1001/jama.2016.12680) (PMID:27570866)

Mangion, K. et al. (2016) Infarct size and left ventricular remodelling after preventive percutaneous coronary intervention. Heart, 102(24), pp. 1980-1987. (doi:10.1136/heartjnl-2015-308660) (PMID:27504003) (PMCID:PMC5256395)

Merodio, J. and Ogden, R. W. (2016) Extension, inflation and torsion of a residually-stressed circular cylindrical tube. Continuum Mechanics and Thermodynamics, 28(1), pp. 157-174. (doi:10.1007/s00161-015-0411-z)

Griffith, B. E. and Luo, X. (2017) Hybrid finite difference/finite element immersed boundary method. International Journal for Numerical Methods in Biomedical Engineering, 33(12), e2888. (doi:10.1002/cnm.2888) (PMID:28425587)

Carrick, D. et al. (2016) Microvascular resistance of the culprit coronary artery in acute ST-elevation myocardial infarction. JCI Insight, 1(6), e85768. (doi:10.1172/jci.insight.85768) (PMID:27699259) (PMCID:PMC5033815)

Ferguson, E. A., Matthiopoulos, J. , Insall, R. H. and Husmeier, D. (2017) Statistical inference of the mechanisms driving collective cell movement. Journal of the Royal Statistical Society: Series C (Applied Statistics), 66(4), pp. 869-890. (doi:10.1111/rssc.12203)

Goodman, M. E., Luo, X. and Hill, N. (2016) A mathematical model on the feedback between wall shear stress and intimal hyperplasia. International Journal of Applied Mechanics, 8(7), 1640011. (doi:10.1142/S1758825116400111)

Gao, H. , Aderhold, A., Mangion, K., Luo, X. , Husmeier, D. and Berry, C. (2017) Changes and classification in myocardial contractile function in the left ventricle following acute myocardial infarction. Interface Focus, 14(132), 20170203. (doi:10.1098/rsif.2017.0203)

Paun, L. M., Qureshi, M. U., Colebank, M., Haider, M. A., Olufsen, M. S., Hill, N. A. and Husmeier, D. (2017) Parameter Inference in the Pulmonary Circulation of Mice. In: 32nd International Workshop on Statistical Modelling, Groningen, Netherlands, 03-07 Jul 2017, pp. 190-195.

Song, Y. et al. (2017) Single-cell genomics based on Raman sorting reveals novel carotenoid-containing bacteria in the Red Sea. Microbial Biotechnology, 10(1), pp. 125-137. (doi:10.1111/1751-7915.12420) (PMID:27748032) (PMCID:PMC5270752)

MacDonald, G., Mackenzie, J.A., Nolan, M. and Insall, R.H. (2016) A computational method for the coupled solution of reaction–diffusion equations on evolving domains and manifolds: application to a model of cell migration and chemotaxis. Journal of Computational Physics, 309, pp. 207-226. (doi:10.1016/j.jcp.2015.12.038) (PMID:27330221) (PMCID:PMC4896117)

Mangion, K. et al. (2016) Myocardial strain in healthy adults across a broad age range as revealed by cardiac magnetic resonance imaging at 1.5 and 3.0T: associations of myocardial strain with myocardial region, age, and sex. Journal of Magnetic Resonance Imaging, 44(5), pp. 1197-1205. (doi:10.1002/jmri.25280) (PMID:27104306) (PMCID:PMC5082565)

Li, K., Ogden, R. W. and Holzapfel, G. A. (2018) Modeling of fibrous biological tissues with a general invariant that excludes compressed fibers. Journal of the Mechanics and Physics of Solids, 110, pp. 38-53. (doi:10.1016/j.jmps.2017.09.005)

Mangion, K. and Berry, C. (2016) Advances in magnetic resonance imaging of the myocardial area at risk and salvage. Circulation: Cardiovascular Imaging, 9(7), e005127. (doi:10.1161/circimaging.116.005127) (PMID:27412660)

Holzapfel, G. A. and Ogden, R. W. eds. (2017) Biomechanics: Trends in Modeling and Simulation. Series: Studies in Mechanobiology, Tissue Engineering and Biomaterials, 20. Springer. ISBN 9783319414737 (doi:10.1007/978-3-319-41475-1)

McGarry, D. J., Shchepinova, M. M., Lillla, S., Hartley, R. C. and Olson, M. F. (2016) A cell-permeable biscyclooctyne as a novel probe for the identification of protein sulfenic acids. ACS Chemical Biology, 11(12), pp. 3300-3304. (doi:10.1021/acschembio.6b00742) (PMID:27792307)

Rutherford, E. et al. (2016) Definition of myocardial tissue abnormalities in end stage renal failure with cardiac magnetic resonance imaging using T1 mapping. Kidney International, 90(4), pp. 845-852. (doi:10.1016/j.kint.2016.06.014)

Hao, Y., Cai, Z., Roper, S. and Luo, X. (2016) An Arnoldi-frontal approach for the stability analysis of flows in a collapsible channel. International Journal of Applied Mechanics, 8(6), 1650073. (doi:10.1142/S1758825116500733)

Clarke, C. J. et al. (2016) The initiator methionine tRNA drives secretion of type II collagen from stromal fibroblasts to promote tumor growth and angiogenesis. Current Biology, 26(6), pp. 755-765. (doi:10.1016/j.cub.2016.01.045) (PMID:26948875) (PMCID:PMC4819511)

Van Hirtum, A., Wu, B., Gao, H. and Luo, X.Y. (2017) Constricted channel flow with different cross-section shapes. European Journal of Mechanics - B/Fluids, 63, pp. 1-8. (doi:10.1016/j.euromechflu.2016.12.009)

Mangion, K., Gao, H. , Husmeier, D. , Luo, X. and Berry, C. (2017) Advances in computational modelling for personalised medicine after myocardial infarction. Heart, (doi:10.1136/heartjnl-2017-311449) (PMID:29127185) (Early Online Publication)

Holzapfel, G. A. and Ogden, R. W. (2017) On fiber dispersion models: exclusion of compressed fibers and spurious model comparisons. Journal of Elasticity, 129(1-2), pp. 49-68. (doi:10.1007/s10659-016-9605-2)

Kovar, H. et al. (2016) The second European interdisciplinary Ewing sarcoma research summit – A joint effort to deconstructing the multiple layers of a complex disease. Oncotarget, 7(8), pp. 8613-8624. (doi:10.18632/oncotarget.6937) (PMID:26802024)

Berry, C. , Carrick, D., Haig, C. and Oldroyd, K. G. (2016) “Waves of Edema” seem implausible. Journal of the American College of Cardiology, 67(15), pp. 1868-1869. (doi:10.1016/j.jacc.2015.11.073) (PMID:27081030)

Gao, H. , Qi, N., Feng, L., Ma, X., Danton, M., Berry, C. and Luo, X. (2017) Modelling mitral valvular dynamics–current trend and future directions. International Journal for Numerical Methods in Biomedical Engineering, 33(10), e2858. (doi:10.1002/cnm.2858) (PMID:27935265)

Li, B., Qiu, Y., Shi, H. and Yin, H. (2016) The importance of lag time extension in determining bacterial resistance to antibiotics. Analyst, 141(10), pp. 3059-3067. (doi:10.1039/C5AN02649K) (PMID:27077143)

Aparício, P., Thompson, M. S. and Watton, P. N. (2016) A novel chemo-mechano-biological model of arterial tissue growth and remodelling. Journal of Biomechanics, 49(12), pp. 2321-2330. (doi:10.1016/j.jbiomech.2016.04.037) (PMID:27184922)

Li, K., Ogden, R. W. and Holzapfel, G. A. (2016) Computational method for excluding fibers under compression in modeling soft fibrous solids. European Journal of Mechanics - A/Solids, 57, pp. 178-193. (doi:10.1016/j.euromechsol.2015.11.003)

Mangion, K., Gao, H. , Mccomb, C., Carrick, D., Clerfond, G., Zhong, X., Luo, X. , Haig, C. and Berry, C. (2016) A novel method for estimating myocardial strain: assessment of deformation tracking against reference magnetic resonance methods in healthy volunteers. Scientific Reports, 6, 38774. (doi:10.1038/srep38774) (PMID:27941903) (PMCID:PMC5150576)

Gao, H. , Feng, L., Qi, N., Berry, C. , Griffith, B. E. and Luo, X. (2017) A coupled mitral valve - left ventricle model with fluid-structure interaction. Medical Engineering and Physics, 47, pp. 128-136. (doi:10.1016/j.medengphy.2017.06.042) (PMID:28751011)

Ogden, R. W. (2017) Nonlinear continuum mechanics and modelling the elasticity of soft biological tissues with a focus on artery walls. In: Holzapfel, G. A. and Ogden, R. W. (eds.) Biomechanics: Trends in Modeling and Simulation. Series: Studies in Mechanobiology, Tissue Engineering and Biomaterials (20). Springer International Publishing, pp. 83-156. ISBN 9783319414737 (doi:10.1007/978-3-319-41475-1_3)

Rauhalammi, S. M.O., Mangion, K., Barrientos, P. H., Carrick, D. J.A., Clerfond, G., McClure, J., McComb, C., Radjenovic, A. and Berry, C. (2016) Native myocardial longitudinal (T1) relaxation time: Regional, age, and sex associations in the healthy adult heart. Journal of Magnetic Resonance Imaging, 44(3), pp. 541-548. (doi:10.1002/jmri.25217) (PMID:26946323) (PMCID:PMC5025725)

Williams, M. C. et al. (2016) Use of coronary computed tomographic angiography to guide management of patients with coronary disease. Journal of the American College of Cardiology, 67(15), pp. 1759-1768. (doi:10.1016/j.jacc.2016.02.026) (PMID:27081014) (PMCID:PMC4829708)

Li, K., Ogden, R. W. and Holzapfel, G. A. (2017) An exponential constitutive model excluding fibers under compression: application to extension-inflation of a residually stressed carotid artery. Mathematics and Mechanics of Solids, (doi:10.1177/1081286517712077) (Early Online Publication)

Johnson, N. P. et al. (2016) Continuum of vasodilator stress from rest to contrast medium to adenosine hyperemia for fractional flow reserve assessment. JACC: Cardiovascular Interventions, 9(8), pp. 757-767. (doi:10.1016/j.jcin.2015.12.273) (PMID:27101902)

Stevens, K., Denby, L., Patel, R. K., Mark, P. B. , Kettlewell, S., Smith, G. L. , Clancy, M. J., Delles, C. and Jardine, A. G. (2017) Deleterious effects of phosphate on vascular and endothelial function via disruption to the nitric oxide pathway. Nephrology Dialysis Transplantation, 32(10), pp. 1617-1627. (doi:10.1093/ndt/gfw252) (PMID:27448672)

McIlvanna, D., Huang, W. E., Davison, P., Glidle, A., Cooper, J. and Yin, H. (2016) Continuous cell sorting in a flow based on single cell resonance Raman spectra. Lab on a Chip, 16(8), pp. 1420-1429. (doi:10.1039/C6LC00251J) (PMID:26974400)

Carrick, D. et al. (2016) Temporal evolution of myocardial hemorrhage and edema in patients after acute ST-elevation myocardial infarction: pathophysiologic insights and clinical implications. Journal of the American Heart Association, 5, e002834. (doi:10.1161/JAHA.115.002834) (PMID:26908408) (PMCID:PMC4802451)

Rath, N. and Olson, M. (2016) Regulation of pancreatic cancer aggressiveness by stromal stiffening. Nature Medicine, 22(5), pp. 462-463. (doi:10.1038/nm.4099) (PMID:27149218)

Carrick, D. et al. (2016) Comparative prognostic utility of indexes of microvascular function alone or in combination in patients with an acute ST-segment elevation myocardial infarction. Circulation, 134(23), pp. 1833-1847. (doi:10.1161/CIRCULATIONAHA.116.022603) (PMID:27803036) (PMCID:PMC5131697)

Tweedy, L., Knecht, D. A., Mackay, G. N. and Insall, R. H. (2016) Self-generated chemoattractant gradients: attractant depletion extends the range and robustness of chemotaxis. PLoS Biology, 14(3), e1002404. (doi:10.1371/journal.pbio.1002404) (PMID:26981861) (PMCID:PMC4794234)

Li, W., Bird, N. C. and Luo, X. (2017) A pointwise method for identifying biomechanical heterogeneity of the human gallbladder. Frontiers in Physiology, 8, 176. (doi:10.3389/fphys.2017.00176) (PMID:28408886) (PMCID:PMC5374253)

Noè, U. , Chen, W. W., Filippone, M., Hill, N. and Husmeier, D. (2017) Inference in a Partial Differential Equations Model of Pulmonary Arterial and Venous Blood Circulation using Statistical Emulation. In: 13th International Conference on Computational Intelligence Methods for Bioinformatics and Biostatistics, Stirling, UK, 01-03 Sep 2016, pp. 184-198. ISBN 9783319678337 (doi:10.1007/978-3-319-67834-4_15)

Boujelben, A. et al. (2016) Multimodality imaging and mathematical modelling of drug delivery to glioblastomas. Interface Focus, 6(5), 20160039. (doi:10.1098/rsfs.2016.0039) (PMID:27708763)

Mackenzie, J.A., Nolan, M. and Insall, R.H. (2016) Local modulation of chemoattractant concentrations by single cells: dissection using a bulk-surface computational model. Interface Focus, 6(5), 20160036. (doi:10.1098/rsfs.2016.0036) (PMID:27708760) (PMCID:PMC4992739)

Ahamed, T., Dorfmann, L. and Ogden, R.W. (2016) Modeling of residually stressed material with application to AAA. Journal of the Mechanical Behavior of Biomedical Materials, 61, pp. 221-234. (doi:10.1016/j.jmbbm.2016.01.012) (PMID:26874252)

Huethorst, E., Hortigon, M. , Zamora-Rodriguez, V., Reynolds, P.M., Burton, F., Smith, G. and Gadegaard, N. (2016) Enhanced human-induced pluripotent stem cell derived cardiomyocyte maturation using a dual microgradient substrate. ACS Biomaterials Science and Engineering, 2(12), pp. 2231-2239. (doi:10.1021/acsbiomaterials.6b00426) (PMID:27990488) (PMCID:PMC5155309)

Chaplain, M. , Ptashnyk, M. and Sturrock, M. (2015) Hopf bifurcation in a gene regulatory network model: Molecular movement causes oscillations. Mathematical Models and Methods in Applied Sciences, 25(06), pp. 1179-1215. (doi:10.1142/S021820251550030X)

Carberry, J. et al. (2016) Remote zone extracellular volume and left ventricular remodeling in survivors of st-elevation myocardial infarction. Hypertension, 68(2), pp. 385-391. (doi:10.1161/HYPERTENSIONAHA.116.07222) (PMID:27354423) (PMCID:PMC4956675)

McCarroll, C. S. et al. (2017) Runx1 deficiency protects against adverse cardiac remodeling after myocardial infarction. Circulation, 137(1), pp. 57-70. (doi:10.1161/CIRCULATIONAHA.117.028911) (PMID:29030345)

Holzapfel, G. A. and Ogden, R. W. (2017) Comparison of two model frameworks for fiber dispersion in the elasticity of soft biological tissues. European Journal of Mechanics - A/Solids, 66, pp. 193-200. (doi:10.1016/j.euromechsol.2017.07.005)

Cai, L., Wang, Y., Gao, H. , Li, Y. and Luo, X. (2017) A mathematical model for active contraction in healthy and failing myocytes and left ventricles. PLoS ONE, 12(4), e0174834. (doi:10.1371/journal.pone.0174834) (PMID:28406991) (PMCID:PMC5391010)

Høydal, M. A. et al. (2016) Exercise training reverses myocardial dysfunction induced by CaMKIIδC overexpression by restoring Ca2+-homeostasis. Journal of Applied Physiology, 121(1), pp. 212-220. (doi:10.1152/japplphysiol.00188.2016) (PMID:27231311)

Wang, L., Hill, N. A. , Roper, S. M. and Luo, X. (2017) Modelling peeling- and pressure-driven propagation of arterial dissection. Journal of Engineering Mathematics, (doi:10.1007/s10665-017-9948-0) (Early Online Publication)

Neisius, U. et al. (2016) Urine proteomics in the diagnosis of stable angina. BMC Cardiovascular Disorders, 16, 70. (doi:10.1186/s12872-016-0246-y) (PMID:27095611) (PMCID:PMC483761)

Fattah, C. et al. (2016) Gene therapy with Angiotensin-(1-9) preserves left ventricular systolic function after myocardial infarction. Journal of the American College of Cardiology, 68(24), pp. 2652-2666. (doi:10.1016/j.jacc.2016.09.946) (PMID:27978950) (PMCID:PMC5158000)

Ferguson, E. A., Matthiopoulos, J. , Insall, R. H. and Husmeier, D. (2016) Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma. Journal of the Royal Society: Interface, 13(123), 20160695. (doi:10.1098/rsif.2016.0695) (PMID:27798280)